Beetles comprise the largest single branch in the Tree of
Life. Since they arose in the Lower Permian, they have undergone an explosive
radiation into more than 350,000 species, or one-quarter of described organisms.
In species numbers, beetles dominate most terrestrial ecosystems. They collectively
represent nearly every feeding habit among insects, from saprophagy, herbivory
and predation to fungivory and parasitism. Though there are insect groups
that are more specialized in each way of life, beetles probably have a larger
impact on our forests and fields than any other group (except possibly ants!).
Because of their species richness, beetles present an excellent context
for evaluating correlates of diversity.
Reflecting in part their sheer numbers and enormous morphological diversity,
few attempts have been made to decipher the phylogeny of beetles as a
whole, leaving us with only marginal knowledge of their history.
The focus of the proposed research is to provide a robust phylogenetic
hypothesis for beetle families and subfamilies, by gathering molecular
sequences from over 3000 species, and morphological data from over 400
species. We anticipate that this will provide a phylogenetic framework
enabling future research on beetle systematics, ecology, and evolution,
and will represent a major leap forward in deciphering what is arguably
among the most important phenomena in the Tree of Life's last 300,000,000
years: the diversification of beetles.
Objectives
We propose to:
* Infer the relationships among the suborders, superfamilies, families,
and subfamilies of beetles:
o Assemble a collection of beetles for comparative morphological and molecular
studies with representatives of adults and larvae for almost every currently
recognized subfamily.
o Gather complete mitochondrial genomes, 8 nuclear genes and one mitochondrial
gene, and 500 morphological characters for 75 species, with grades of
lesser amounts of data to 3300 more species.
o Establish an online, high quality, vouchered database of morphological
character states and species, complete with images.
* Develop the necessary bioinformatics tools to make this efficient and
practical:
o Build a DNA sequence workflow solution that will feature a graphical
user interface; storage in databases; an automated processing of sequences,
including quality checks, that will take one directly from chromatograms
to alignments; and connections to various inference engines.
o Extend Mesquite's collaborative matrix editing tools to allow remote
editing of a morphological database to allow for (1c).
* Use the inferred relationships of beetles to study the evolution of
beetle life histories and the and the processes of this diversification,
including estimating divergence times of major beetle subgroups/feeding
types by using fossil information and molecular dating.
* Make our results known to a broader audience:
o Develop the Tree of Life Web Project for Coleoptera, adding pages for
all subfamilies and families.
o Develop an English/Spanish traveling exhibit regarding beetles and the
Tree of Life at the Harvard Museum of Natural History for travel to museums
(e,g., the Field Museum, Santa Barbara Museum) within the U.S.A. and abroad.
o Expand the Lawrence et al. (1999) CSIRO CD ROM illustrated keys to beetle
families and subfamilies.
o Provide training in integrated insect systematics and evolution to students
and other researchers, reinforcing ties within the community of beetle
researchers, among AToL projects, and with the larger community of scholars
and the public. |